Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Gm11509-201ENSMUST00000117358 325 ntBASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Gm24749-201ENSMUST00000157838 343 ntBASIC10.47□□□□□ -0.73
H2afjQ8R1M2 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Mir8093-201ENSMUST00000185043 137 ntBASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Gm3332-201ENSMUST00000189337 928 ntBASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
H2afjQ8R1M2 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Gm23596-201ENSMUST00000104304 132 ntBASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Gm11783-201ENSMUST00000119549 885 ntBASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Gm18730-201ENSMUST00000218038 343 ntBASIC10.46□□□□□ -0.73
H2afjQ8R1M2 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Gm8385-201ENSMUST00000058999 643 ntBASIC10.46□□□□□ -0.73
H2afjQ8R1M2 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
H2afjQ8R1M2 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 283.3 ms