Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Gm37301-201ENSMUST00000195412 568 ntBASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Gm43118-201ENSMUST00000199149 775 ntBASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Gm9353-201ENSMUST00000200472 604 ntBASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Gm40466-201ENSMUST00000212174 422 ntBASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ebf4Q8K4J2 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Ebf4Q8K4J2 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Gm44798-201ENSMUST00000208123 2410 ntBASIC10.21□□□□□ -0.78
Ebf4Q8K4J2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Gm11531-201ENSMUST00000117614 555 ntBASIC10.2□□□□□ -0.78
Ebf4Q8K4J2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms