Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.88□□□□□ -0.19
Smc5Q8CG46 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc5Q8CG46 AC108416.1-201ENSMUST00000228755 1558 ntBASIC13.88□□□□□ -0.19
Smc5Q8CG46 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.87□□□□□ -0.19
Smc5Q8CG46 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.87□□□□□ -0.19
Smc5Q8CG46 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.87□□□□□ -0.19
Smc5Q8CG46 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Gm45186-201ENSMUST00000206874 478 ntBASIC13.87□□□□□ -0.19
Smc5Q8CG46 Gm19208-201ENSMUST00000213861 912 ntBASIC13.87□□□□□ -0.19
Smc5Q8CG46 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Gm8385-201ENSMUST00000058999 643 ntBASIC13.87□□□□□ -0.19
Smc5Q8CG46 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc5Q8CG46 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Gm10829-201ENSMUST00000202084 2988 ntBASIC13.86□□□□□ -0.19
Smc5Q8CG46 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 AC154528.2-201ENSMUST00000228432 3023 ntBASIC13.86□□□□□ -0.19
Smc5Q8CG46 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Gm15566-201ENSMUST00000121130 590 ntBASIC13.86□□□□□ -0.19
Smc5Q8CG46 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.86□□□□□ -0.19
Smc5Q8CG46 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.86□□□□□ -0.19
Smc5Q8CG46 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Gm18367-201ENSMUST00000176139 600 ntBASIC13.86□□□□□ -0.19
Smc5Q8CG46 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.86□□□□□ -0.19
Smc5Q8CG46 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Gm45331-201ENSMUST00000209868 554 ntBASIC13.86□□□□□ -0.19
Smc5Q8CG46 Gm18730-201ENSMUST00000218038 343 ntBASIC13.86□□□□□ -0.19
Smc5Q8CG46 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Olfr584-201ENSMUST00000098210 964 ntBASIC13.86□□□□□ -0.19
Smc5Q8CG46 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms