Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Gm27910-201ENSMUST00000185004 107 ntBASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Gm43186-201ENSMUST00000198130 824 ntBASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Gm44980-201ENSMUST00000205826 314 ntBASIC13.32□□□□□ -0.28
Nup88Q8CEC0 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup88Q8CEC0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Gm38117-201ENSMUST00000194653 939 ntBASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Gm6439-201ENSMUST00000199849 862 ntBASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup88Q8CEC0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Gm11451-201ENSMUST00000118946 630 ntBASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Gm16071-201ENSMUST00000119589 793 ntBASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Gm17826-201ENSMUST00000189720 798 ntBASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Gm43966-201ENSMUST00000203301 612 ntBASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nup88Q8CEC0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms