Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Gm5369-201ENSMUST00000217499 588 ntBASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc38Q8CDN8 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm23200-201ENSMUST00000104379 132 ntBASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm14058-201ENSMUST00000116082 735 ntBASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm22711-201ENSMUST00000116890 133 ntBASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm15566-201ENSMUST00000121130 590 ntBASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm22846-201ENSMUST00000157706 270 ntBASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Ntng1-201ENSMUST00000051253 327 ntBASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc38Q8CDN8 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm28693-201ENSMUST00000189622 2638 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm14028-201ENSMUST00000117434 479 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm13809-201ENSMUST00000117921 597 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm11941-201ENSMUST00000119904 610 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm15549-201ENSMUST00000121595 622 ntBASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc38Q8CDN8 Gm2383-201ENSMUST00000181461 807 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms