Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.61□□□□□ -0.55
Trub1Q8C0D0 B9d1os-201ENSMUST00000137010 674 ntBASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Mir7051-201ENSMUST00000184167 73 ntBASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Gm5468-202ENSMUST00000227851 682 ntBASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.61□□□□□ -0.55
Trub1Q8C0D0 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trub1Q8C0D0 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.6□□□□□ -0.55
Trub1Q8C0D0 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Gm8302-201ENSMUST00000119217 852 ntBASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.6□□□□□ -0.55
Trub1Q8C0D0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms