Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim35Q8C006 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim35Q8C006 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim35Q8C006 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Zfp982-202ENSMUST00000105721 1488 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm20712-201ENSMUST00000176387 1491 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 AC154207.1-201ENSMUST00000221924 1483 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm5387-201ENSMUST00000119776 857 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm13080-201ENSMUST00000120556 420 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm24385-201ENSMUST00000122694 350 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim35Q8C006 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC12.98□□□□□ -0.33
Trim35Q8C006 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm22895-201ENSMUST00000157508 308 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Mir7085-201ENSMUST00000184353 66 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm29127-201ENSMUST00000188304 517 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm7946-201ENSMUST00000203326 958 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm44142-201ENSMUST00000203358 311 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm44861-201ENSMUST00000208325 1220 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm5624-204ENSMUST00000227882 842 ntAPPRIS P5 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm6091-201ENSMUST00000098307 165 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim35Q8C006 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm37995-201ENSMUST00000194958 1714 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm37283-201ENSMUST00000193111 1571 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 Gm43158-201ENSMUST00000198484 1555 ntBASIC12.98□□□□□ -0.33
Trim35Q8C006 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim35Q8C006 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim35Q8C006 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim35Q8C006 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim35Q8C006 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm15470-201ENSMUST00000119135 1371 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 163.9 ms