Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC102847.1-202ENSMUST00000226313 1245 ntBASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Gm8420-201ENSMUST00000097103 598 ntBASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Gm14005-210ENSMUST00000225087 1413 ntBASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC15.4■□□□□ 0.06
Usp40Q8BWR4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Usp40Q8BWR4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Gm14274-201ENSMUST00000117182 615 ntBASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Gm5944-201ENSMUST00000118182 1001 ntBASIC15.39■□□□□ 0.05
Usp40Q8BWR4 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Gm16167-201ENSMUST00000160428 1065 ntBASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 AC140375.1-201ENSMUST00000225421 694 ntBASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Gm6641-201ENSMUST00000196100 1315 ntBASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Usp40Q8BWR4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Gm14592-201ENSMUST00000117201 560 ntBASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Gm13039-201ENSMUST00000118638 794 ntBASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Gm12129-201ENSMUST00000120104 1147 ntBASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Gm5210-201ENSMUST00000182150 1010 ntBASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Gm18801-201ENSMUST00000186616 536 ntBASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Gm43969-201ENSMUST00000204833 535 ntBASIC15.38■□□□□ 0.05
Usp40Q8BWR4 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Gm43984-201ENSMUST00000204572 2864 ntBASIC15.38■□□□□ 0.05
Usp40Q8BWR4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Usp40Q8BWR4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Usp40Q8BWR4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms