Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Ttc28Q80XJ3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ttc28Q80XJ3 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ttc28Q80XJ3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm11700-201ENSMUST00000119409 403 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm5205-201ENSMUST00000182253 1003 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Mir6359-201ENSMUST00000183668 81 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm44740-201ENSMUST00000205603 1614 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Ighv13-1-201ENSMUST00000103480 294 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm5526-201ENSMUST00000153604 423 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm43460-201ENSMUST00000202491 1057 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 AC125409.3-201ENSMUST00000223488 653 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 CT010505.2-201ENSMUST00000227918 998 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.47□□□□□ -0.89
Ttc28Q80XJ3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Gm5976-201ENSMUST00000180794 996 ntBASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Ighv5-1-201ENSMUST00000193324 353 ntBASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Gm7880-201ENSMUST00000203748 871 ntBASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 AC151836.1-201ENSMUST00000228730 1637 ntBASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ttc28Q80XJ3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ttc28Q80XJ3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms