Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.27□□□□□ -0.61
Rpp38Q80UU2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpp38Q80UU2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpp38Q80UU2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpp38Q80UU2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpp38Q80UU2 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpp38Q80UU2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rpp38Q80UU2 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Gm4917-201ENSMUST00000121452 650 ntBASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.26□□□□□ -0.61
Rpp38Q80UU2 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rpp38Q80UU2 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Gm14592-201ENSMUST00000117201 560 ntBASIC11.25□□□□□ -0.61
Rpp38Q80UU2 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Gm17391-201ENSMUST00000171036 126 ntBASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Gm7467-201ENSMUST00000185173 652 ntBASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Gm9111-201ENSMUST00000219394 709 ntBASIC11.25□□□□□ -0.61
Rpp38Q80UU2 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Nsd1-205ENSMUST00000224693 852 ntBASIC11.25□□□□□ -0.61
Rpp38Q80UU2 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rpp38Q80UU2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rpp38Q80UU2 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rpp38Q80UU2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 319.8 ms