Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf139Q7TMV1 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Gm14263-201ENSMUST00000117955 746 ntBASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Gm10263-201ENSMUST00000085163 300 ntBASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf139Q7TMV1 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf139Q7TMV1 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf139Q7TMV1 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf139Q7TMV1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rnf139Q7TMV1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf139Q7TMV1 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf139Q7TMV1 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Gm22334-201ENSMUST00000158070 133 ntBASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Gm30946-201ENSMUST00000198288 724 ntBASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Gm3786-201ENSMUST00000202659 378 ntBASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf139Q7TMV1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf139Q7TMV1 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf139Q7TMV1 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Rnf139Q7TMV1 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf139Q7TMV1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf139Q7TMV1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf139Q7TMV1 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms