Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm15707-201ENSMUST00000118804 996 ntBASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx55Q6ZPL9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Gm45258-201ENSMUST00000210042 853 ntBASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.82□□□□□ -0.36
Ddx55Q6ZPL9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms