Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Gm16441-201ENSMUST00000138176 924 ntBASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Gm13827-201ENSMUST00000148801 372 ntBASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Gm6038-201ENSMUST00000154310 948 ntBASIC13.07□□□□□ -0.32
Nup98Q6PFD9 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Gm5808-201ENSMUST00000178090 357 ntBASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Gm14005-208ENSMUST00000223654 681 ntBASIC13.07□□□□□ -0.32
Nup98Q6PFD9 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Gm42833-201ENSMUST00000196019 2124 ntBASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Gm42971-201ENSMUST00000199228 2079 ntBASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Gm28624-201ENSMUST00000186430 2131 ntBASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nup98Q6PFD9 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm23769-201ENSMUST00000104441 121 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm8152-201ENSMUST00000120842 637 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm25288-201ENSMUST00000122800 265 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 n-R5s130-201ENSMUST00000178128 119 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm24312-201ENSMUST00000178677 119 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 n-R5s106-201ENSMUST00000179060 119 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 n-R5s118-201ENSMUST00000179887 119 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Mir6387-201ENSMUST00000184042 108 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm28746-201ENSMUST00000187453 380 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm37207-201ENSMUST00000194284 296 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm45745-201ENSMUST00000211447 1180 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm45165-201ENSMUST00000207763 1631 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 CT010480.4-201ENSMUST00000224654 2283 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Pck2-205ENSMUST00000226352 2784 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm12948-201ENSMUST00000119406 682 ntBASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup98Q6PFD9 Gm42617-201ENSMUST00000197640 1229 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms