Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gm15824-201ENSMUST00000119516 955 ntBASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gm5706-201ENSMUST00000181525 993 ntBASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gm43133-201ENSMUST00000197472 463 ntBASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 AC165080.1-201ENSMUST00000215257 3123 ntBASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Inpp4a-205ENSMUST00000132401 3234 ntTSL 5 BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Gm24845-201ENSMUST00000158034 109 ntBASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Rprl1-201ENSMUST00000158050 327 ntBASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Gm9996-201ENSMUST00000070359 913 ntBASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Gm42460-201ENSMUST00000198863 2567 ntBASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.66□□□□□ -0.7
Rnf220Q6PDX6 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf220Q6PDX6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms