Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Gm11578-201ENSMUST00000118530 459 ntBASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Gm22846-201ENSMUST00000157706 270 ntBASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Gm43564-201ENSMUST00000196185 211 ntBASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm11560-201ENSMUST00000117567 948 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm25830-201ENSMUST00000158923 132 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm9135-201ENSMUST00000182963 990 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm16547-201ENSMUST00000159474 293 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smchd1Q6P5D8 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Gm13039-201ENSMUST00000118638 794 ntBASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Gm17221-201ENSMUST00000163909 481 ntBASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Gm17073-201ENSMUST00000168069 556 ntBASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Gm18014-201ENSMUST00000183369 817 ntBASIC12.27□□□□□ -0.44
Smchd1Q6P5D8 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 163.9 ms