Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scube3Q66PY1 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scube3Q66PY1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scube3Q66PY1 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Scube3Q66PY1 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scube3Q66PY1 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scube3Q66PY1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scube3Q66PY1 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.14□□□□□ -0.47
Scube3Q66PY1 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.14□□□□□ -0.47
Scube3Q66PY1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scube3Q66PY1 Gm28649-201ENSMUST00000189153 1581 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm44746-201ENSMUST00000205565 1349 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm5605-201ENSMUST00000208940 1305 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm11949-201ENSMUST00000117640 372 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Mir8115-201ENSMUST00000184992 119 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm43002-201ENSMUST00000200310 155 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm7504-201ENSMUST00000201449 424 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm5051-201ENSMUST00000204085 485 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 AC154515.3-201ENSMUST00000225081 1159 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 AC133517.2-201ENSMUST00000226820 690 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.13□□□□□ -0.47
Scube3Q66PY1 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Scube3Q66PY1 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Scube3Q66PY1 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Gm11834-201ENSMUST00000122257 585 ntBASIC12.12□□□□□ -0.47
Scube3Q66PY1 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Gm23045-201ENSMUST00000175041 96 ntBASIC12.12□□□□□ -0.47
Scube3Q66PY1 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.12□□□□□ -0.47
Scube3Q66PY1 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.12□□□□□ -0.47
Scube3Q66PY1 Gm42591-201ENSMUST00000197249 700 ntBASIC12.12□□□□□ -0.47
Scube3Q66PY1 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.12□□□□□ -0.47
Scube3Q66PY1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.12□□□□□ -0.47
Scube3Q66PY1 Gm43852-201ENSMUST00000202098 917 ntBASIC12.12□□□□□ -0.47
Scube3Q66PY1 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.12□□□□□ -0.47
Scube3Q66PY1 AC096628.1-201ENSMUST00000226060 641 ntBASIC12.12□□□□□ -0.47
Scube3Q66PY1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scube3Q66PY1 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms