Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col11a2Q64739 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Gm7781-201ENSMUST00000117258 788 ntBASIC13.36□□□□□ -0.27
Col11a2Q64739 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.36□□□□□ -0.27
Col11a2Q64739 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC13.36□□□□□ -0.27
Col11a2Q64739 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Col11a2Q64739 Gm5766-202ENSMUST00000161633 799 ntBASIC13.36□□□□□ -0.27
Col11a2Q64739 Gm5501-201ENSMUST00000165917 832 ntBASIC13.36□□□□□ -0.27
Col11a2Q64739 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC13.36□□□□□ -0.27
Col11a2Q64739 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Col11a2Q64739 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Col11a2Q64739 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Col11a2Q64739 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col11a2Q64739 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC13.35□□□□□ -0.27
Col11a2Q64739 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Col11a2Q64739 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Col11a2Q64739 Gm45663-201ENSMUST00000210429 1632 ntBASIC13.35□□□□□ -0.27
Col11a2Q64739 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Col11a2Q64739 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Gm12397-201ENSMUST00000117674 615 ntBASIC13.35□□□□□ -0.27
Col11a2Q64739 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC13.35□□□□□ -0.27
Col11a2Q64739 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC13.35□□□□□ -0.27
Col11a2Q64739 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC13.35□□□□□ -0.27
Col11a2Q64739 Gm26532-201ENSMUST00000180630 690 ntBASIC13.35□□□□□ -0.27
Col11a2Q64739 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 AC154433.1-201ENSMUST00000224401 1183 ntBASIC13.35□□□□□ -0.27
Col11a2Q64739 AC164883.7-201ENSMUST00000228534 851 ntBASIC13.35□□□□□ -0.27
Col11a2Q64739 AC107711.3-201ENSMUST00000228939 1035 ntBASIC13.35□□□□□ -0.27
Col11a2Q64739 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col11a2Q64739 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.35□□□□□ -0.27
Col11a2Q64739 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col11a2Q64739 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col11a2Q64739 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col11a2Q64739 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col11a2Q64739 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.34□□□□□ -0.27
Col11a2Q64739 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col11a2Q64739 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col11a2Q64739 Gm22751-201ENSMUST00000102077 109 ntBASIC13.34□□□□□ -0.27
Col11a2Q64739 Mir692-3-201ENSMUST00000102079 109 ntBASIC13.34□□□□□ -0.27
Col11a2Q64739 Mir692-2-201ENSMUST00000102081 109 ntBASIC13.34□□□□□ -0.27
Col11a2Q64739 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col11a2Q64739 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col11a2Q64739 Gm21963-201ENSMUST00000179519 330 ntBASIC13.34□□□□□ -0.27
Col11a2Q64739 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC13.34□□□□□ -0.27
Col11a2Q64739 Gm19058-201ENSMUST00000192135 598 ntBASIC13.34□□□□□ -0.27
Col11a2Q64739 Gm38145-201ENSMUST00000192319 693 ntBASIC13.34□□□□□ -0.27
Col11a2Q64739 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col11a2Q64739 Gm44908-201ENSMUST00000208610 266 ntBASIC13.34□□□□□ -0.27
Col11a2Q64739 Gm18122-201ENSMUST00000211390 904 ntBASIC13.34□□□□□ -0.27
Col11a2Q64739 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col11a2Q64739 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col11a2Q64739 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col11a2Q64739 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col11a2Q64739 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col11a2Q64739 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col11a2Q64739 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Col11a2Q64739 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col11a2Q64739 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col11a2Q64739 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms