Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.76□□□□□ -0.69
Nr1h4Q60641 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.76□□□□□ -0.69
Nr1h4Q60641 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm27627-201ENSMUST00000183644 150 ntBASIC10.76□□□□□ -0.69
Nr1h4Q60641 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm13097-201ENSMUST00000210722 397 ntBASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.76□□□□□ -0.69
Nr1h4Q60641 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.76□□□□□ -0.69
Nr1h4Q60641 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.76□□□□□ -0.69
Nr1h4Q60641 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm10478-201ENSMUST00000084451 396 ntBASIC10.76□□□□□ -0.69
Nr1h4Q60641 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.76□□□□□ -0.69
Nr1h4Q60641 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nr1h4Q60641 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.75□□□□□ -0.69
Nr1h4Q60641 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm7150-201ENSMUST00000122032 981 ntBASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm15276-201ENSMUST00000145953 498 ntBASIC10.75□□□□□ -0.69
Nr1h4Q60641 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm10807-201ENSMUST00000177134 795 ntBASIC10.75□□□□□ -0.69
Nr1h4Q60641 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.75□□□□□ -0.69
Nr1h4Q60641 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm4978-201ENSMUST00000071565 801 ntBASIC10.75□□□□□ -0.69
Nr1h4Q60641 Gm26448-201ENSMUST00000082446 203 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms