Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Gm44506-201ENSMUST00000206278 965 ntBASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Gm17825-201ENSMUST00000206836 794 ntBASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav5d-4Q5R1F6 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm22920-201ENSMUST00000102175 109 ntBASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm7741-201ENSMUST00000181445 989 ntBASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm8574-201ENSMUST00000203207 924 ntBASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav5d-4Q5R1F6 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav5d-4Q5R1F6 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 388.8 ms