Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Gm28019-201ENSMUST00000178138 101 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm25571-201ENSMUST00000178322 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm25355-201ENSMUST00000178456 101 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm24975-201ENSMUST00000178492 101 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm23189-201ENSMUST00000178954 102 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm25100-201ENSMUST00000179750 101 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm23064-201ENSMUST00000179866 101 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm42655-201ENSMUST00000202782 1134 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 AC153152.3-201ENSMUST00000222188 1135 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Usp48Q3V0C5 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gm12663-201ENSMUST00000118481 958 ntBASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gm25554-201ENSMUST00000158075 113 ntBASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gm43854-201ENSMUST00000200418 394 ntBASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.01□□□□□ -0.17
Usp48Q3V0C5 Gm38194-201ENSMUST00000194529 2211 ntBASIC14□□□□□ -0.17
Usp48Q3V0C5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp48Q3V0C5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Usp48Q3V0C5 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Usp48Q3V0C5 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Usp48Q3V0C5 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp48Q3V0C5 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp48Q3V0C5 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC14□□□□□ -0.17
Usp48Q3V0C5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp48Q3V0C5 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp48Q3V0C5 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14□□□□□ -0.17
Usp48Q3V0C5 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp48Q3V0C5 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp48Q3V0C5 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC14□□□□□ -0.17
Usp48Q3V0C5 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp48Q3V0C5 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC14□□□□□ -0.17
Usp48Q3V0C5 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14□□□□□ -0.17
Usp48Q3V0C5 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp48Q3V0C5 Gm23675-201ENSMUST00000157311 125 ntBASIC14□□□□□ -0.17
Usp48Q3V0C5 Gm25830-201ENSMUST00000158923 132 ntBASIC14□□□□□ -0.17
Usp48Q3V0C5 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Usp48Q3V0C5 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14□□□□□ -0.17
Usp48Q3V0C5 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC14□□□□□ -0.17
Usp48Q3V0C5 Gm7741-201ENSMUST00000181445 989 ntBASIC14□□□□□ -0.17
Usp48Q3V0C5 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Usp48Q3V0C5 Gm45085-201ENSMUST00000209100 441 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms