Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28047Q3US59 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28047Q3US59 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Gm28047Q3US59 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.82□□□□□ -0.36
Gm28047Q3US59 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28047Q3US59 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm28047Q3US59 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28047Q3US59 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28047Q3US59 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm28047Q3US59 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm28047Q3US59 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.82□□□□□ -0.36
Gm28047Q3US59 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.81□□□□□ -0.36
Gm28047Q3US59 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.81□□□□□ -0.36
Gm28047Q3US59 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.81□□□□□ -0.36
Gm28047Q3US59 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Gm24074-201ENSMUST00000158178 260 ntBASIC12.81□□□□□ -0.36
Gm28047Q3US59 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Gm25732-201ENSMUST00000175168 60 ntBASIC12.81□□□□□ -0.36
Gm28047Q3US59 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Gm23694-201ENSMUST00000179335 110 ntBASIC12.81□□□□□ -0.36
Gm28047Q3US59 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.81□□□□□ -0.36
Gm28047Q3US59 Mir6927-201ENSMUST00000184494 71 ntBASIC12.81□□□□□ -0.36
Gm28047Q3US59 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.81□□□□□ -0.36
Gm28047Q3US59 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.81□□□□□ -0.36
Gm28047Q3US59 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm28047Q3US59 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm28047Q3US59 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.8□□□□□ -0.36
Gm28047Q3US59 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Gm12419-201ENSMUST00000116649 636 ntBASIC12.8□□□□□ -0.36
Gm28047Q3US59 Gm16219-201ENSMUST00000120096 274 ntBASIC12.8□□□□□ -0.36
Gm28047Q3US59 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.8□□□□□ -0.36
Gm28047Q3US59 Gm37981-201ENSMUST00000194280 535 ntBASIC12.8□□□□□ -0.36
Gm28047Q3US59 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.8□□□□□ -0.36
Gm28047Q3US59 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.8□□□□□ -0.36
Gm28047Q3US59 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm28047Q3US59 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28047Q3US59 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms