Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm14460-201ENSMUST00000121511 639 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm6918-201ENSMUST00000167622 1222 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm17391-201ENSMUST00000171036 126 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm22693-201ENSMUST00000175049 442 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm9630-201ENSMUST00000178304 885 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm42452-201ENSMUST00000199749 617 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm43916-201ENSMUST00000205062 967 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm17910-201ENSMUST00000211038 838 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 AC159205.5-202ENSMUST00000224849 386 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 AC154634.2-201ENSMUST00000225983 1184 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm1821-202ENSMUST00000227415 750 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Mir339-201ENSMUST00000083659 96 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.67□□□□□ -0.86
Znf48Q3US17 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Znf48Q3US17 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Znf48Q3US17 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Znf48Q3US17 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.66□□□□□ -0.86
Znf48Q3US17 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Znf48Q3US17 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Znf48Q3US17 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
Znf48Q3US17 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Znf48Q3US17 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Znf48Q3US17 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Znf48Q3US17 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Znf48Q3US17 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Znf48Q3US17 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.66□□□□□ -0.86
Znf48Q3US17 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.66□□□□□ -0.86
Znf48Q3US17 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Znf48Q3US17 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.66□□□□□ -0.86
Znf48Q3US17 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Znf48Q3US17 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Znf48Q3US17 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.66□□□□□ -0.86
Znf48Q3US17 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
Znf48Q3US17 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Znf48Q3US17 Gm13035-201ENSMUST00000117496 342 ntBASIC9.66□□□□□ -0.86
Znf48Q3US17 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Znf48Q3US17 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.66□□□□□ -0.86
Znf48Q3US17 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.66□□□□□ -0.86
Znf48Q3US17 Gm11675-201ENSMUST00000121873 832 ntBASIC9.66□□□□□ -0.86
Znf48Q3US17 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Znf48Q3US17 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.66□□□□□ -0.86
Znf48Q3US17 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms