Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.22□□□□□ -0.93
Trim63Q38HM4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 1700126A01Rik-201ENSMUST00000185283 2061 ntBASIC9.22□□□□□ -0.93
Trim63Q38HM4 Sfi1-201ENSMUST00000066391 3898 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Mpp2-201ENSMUST00000017458 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Olfr1395-203ENSMUST00000214195 2984 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Gm45797-201ENSMUST00000212759 1921 ntBASIC9.21□□□□□ -0.93
Trim63Q38HM4 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Gm43411-201ENSMUST00000196235 1579 ntBASIC9.21□□□□□ -0.93
Trim63Q38HM4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
Trim63Q38HM4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.21□□□□□ -0.94
Trim63Q38HM4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.21□□□□□ -0.94
Trim63Q38HM4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Gm43125-201ENSMUST00000201724 730 ntBASIC9.21□□□□□ -0.94
Trim63Q38HM4 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC9.21□□□□□ -0.94
Trim63Q38HM4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Gm31135-201ENSMUST00000208460 1782 ntTSL 5 BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Ppfibp1-202ENSMUST00000111623 4782 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trim63Q38HM4 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trim63Q38HM4 4933427D06Rik-204ENSMUST00000168837 2467 ntTSL 5 BASIC9.21□□□□□ -0.94
Trim63Q38HM4 AC155270.1-201ENSMUST00000221626 4028 ntBASIC9.21□□□□□ -0.94
Trim63Q38HM4 Cd300a-202ENSMUST00000106582 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Utp14b-202ENSMUST00000151622 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Cphx3-201ENSMUST00000163305 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 9230112E08Rik-202ENSMUST00000189441 3352 ntBASIC9.2□□□□□ -0.94
Trim63Q38HM4 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm12463-201ENSMUST00000118271 849 ntBASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm2213-201ENSMUST00000197485 688 ntBASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm43084-201ENSMUST00000200696 947 ntBASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.2□□□□□ -0.94
Trim63Q38HM4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.2□□□□□ -0.94
Trim63Q38HM4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC9.2□□□□□ -0.94
Trim63Q38HM4 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 347.1 ms