Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Col9a1Q05722 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.56□□□□□ -0.56
Col9a1Q05722 Gm42603-201ENSMUST00000199893 2146 ntBASIC11.56□□□□□ -0.56
Col9a1Q05722 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col9a1Q05722 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a1Q05722 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Col9a1Q05722 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Col9a1Q05722 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm14356-201ENSMUST00000118322 869 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm14103-201ENSMUST00000119075 366 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm26976-201ENSMUST00000182929 908 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Tspy-ps-203ENSMUST00000186546 989 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm5259-201ENSMUST00000191231 800 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a1Q05722 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm43966-201ENSMUST00000203301 612 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a1Q05722 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC11.55□□□□□ -0.56
Col9a1Q05722 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 AC121804.1-201ENSMUST00000221016 394 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 AC166830.1-201ENSMUST00000224201 533 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Col9a1Q05722 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col9a1Q05722 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC11.55□□□□□ -0.56
Col9a1Q05722 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.55□□□□□ -0.56
Col9a1Q05722 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a1Q05722 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col9a1Q05722 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.54□□□□□ -0.56
Col9a1Q05722 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col9a1Q05722 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms