Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarcc1P97496 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.15□□□□□ -0.14
Smarcc1P97496 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc1P97496 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smarcc1P97496 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Gm37122-201ENSMUST00000195313 1567 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Gm42970-201ENSMUST00000196407 1352 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Gm23595-201ENSMUST00000104306 130 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC14.14□□□□□ -0.15
Smarcc1P97496 Gm4917-201ENSMUST00000121452 650 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC14.14□□□□□ -0.15
Smarcc1P97496 Mir6973a-201ENSMUST00000183646 78 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC14.14□□□□□ -0.15
Smarcc1P97496 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcc1P97496 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 AC154435.1-201ENSMUST00000223938 959 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 AC159002.1-201ENSMUST00000226714 924 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 AC154407.1-201ENSMUST00000226777 526 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Gm10580-201ENSMUST00000097985 396 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 Gm10582-201ENSMUST00000097987 396 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 Gm10583-201ENSMUST00000097988 396 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smarcc1P97496 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcc1P97496 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Gm42432-201ENSMUST00000197902 1617 ntBASIC14.14□□□□□ -0.15
Smarcc1P97496 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc1P97496 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcc1P97496 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smarcc1P97496 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smarcc1P97496 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Smarcc1P97496 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcc1P97496 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.13□□□□□ -0.15
Smarcc1P97496 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Gm8019-201ENSMUST00000119317 587 ntBASIC14.13□□□□□ -0.15
Smarcc1P97496 Gm22344-201ENSMUST00000122642 278 ntBASIC14.13□□□□□ -0.15
Smarcc1P97496 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC14.13□□□□□ -0.15
Smarcc1P97496 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Gm16547-201ENSMUST00000159474 293 ntBASIC14.13□□□□□ -0.15
Smarcc1P97496 Gm3329-201ENSMUST00000159873 556 ntBASIC14.13□□□□□ -0.15
Smarcc1P97496 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Gm18733-202ENSMUST00000174447 401 ntBASIC14.13□□□□□ -0.15
Smarcc1P97496 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC14.13□□□□□ -0.15
Smarcc1P97496 Gm19927-201ENSMUST00000185792 781 ntBASIC14.13□□□□□ -0.15
Smarcc1P97496 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcc1P97496 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcc1P97496 AC154759.1-201ENSMUST00000224137 1159 ntBASIC14.13□□□□□ -0.15
Smarcc1P97496 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Smarcc1P97496 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcc1P97496 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc1P97496 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcc1P97496 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Smarcc1P97496 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms