Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Lig3P97386 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.41□□□□□ -0.42
Lig3P97386 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.41□□□□□ -0.42
Lig3P97386 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.41□□□□□ -0.42
Lig3P97386 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.41□□□□□ -0.42
Lig3P97386 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Gm45856-201ENSMUST00000212752 416 ntBASIC12.41□□□□□ -0.42
Lig3P97386 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.41□□□□□ -0.42
Lig3P97386 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.41□□□□□ -0.42
Lig3P97386 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.41□□□□□ -0.42
Lig3P97386 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lig3P97386 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lig3P97386 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Lig3P97386 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lig3P97386 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.4□□□□□ -0.42
Lig3P97386 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.4□□□□□ -0.42
Lig3P97386 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Lig3P97386 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.4□□□□□ -0.42
Lig3P97386 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.4□□□□□ -0.42
Lig3P97386 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.4□□□□□ -0.42
Lig3P97386 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.4□□□□□ -0.42
Lig3P97386 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.4□□□□□ -0.42
Lig3P97386 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lig3P97386 Gm29499-201ENSMUST00000189151 486 ntBASIC12.4□□□□□ -0.42
Lig3P97386 Gm28329-201ENSMUST00000191208 689 ntBASIC12.4□□□□□ -0.42
Lig3P97386 Gm29171-201ENSMUST00000191397 486 ntBASIC12.4□□□□□ -0.42
Lig3P97386 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.4□□□□□ -0.42
Lig3P97386 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.4□□□□□ -0.42
Lig3P97386 Gm18059-201ENSMUST00000208073 580 ntBASIC12.4□□□□□ -0.42
Lig3P97386 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.4□□□□□ -0.42
Lig3P97386 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.4□□□□□ -0.42
Lig3P97386 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lig3P97386 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lig3P97386 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.4□□□□□ -0.42
Lig3P97386 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lig3P97386 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lig3P97386 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.39□□□□□ -0.43
Lig3P97386 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.39□□□□□ -0.43
Lig3P97386 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Lig3P97386 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lig3P97386 Gm8731-201ENSMUST00000118088 412 ntBASIC12.39□□□□□ -0.43
Lig3P97386 Gm11354-201ENSMUST00000121974 422 ntBASIC12.39□□□□□ -0.43
Lig3P97386 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.39□□□□□ -0.43
Lig3P97386 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.39□□□□□ -0.43
Lig3P97386 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.39□□□□□ -0.43
Lig3P97386 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.39□□□□□ -0.43
Lig3P97386 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.39□□□□□ -0.43
Lig3P97386 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.39□□□□□ -0.43
Lig3P97386 Gm24398-201ENSMUST00000157870 109 ntBASIC12.39□□□□□ -0.43
Lig3P97386 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lig3P97386 Gm29410-201ENSMUST00000188383 694 ntBASIC12.39□□□□□ -0.43
Lig3P97386 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lig3P97386 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.39□□□□□ -0.43
Lig3P97386 Gm18204-201ENSMUST00000209835 793 ntBASIC12.39□□□□□ -0.43
Lig3P97386 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Gm5705-201ENSMUST00000066241 711 ntBASIC12.39□□□□□ -0.43
Lig3P97386 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lig3P97386 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lig3P97386 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms