Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43cP86449 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim43cP86449 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trim43cP86449 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim43cP86449 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Gm37826-201ENSMUST00000195329 322 ntBASIC12.27□□□□□ -0.45
Trim43cP86449 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim43cP86449 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim43cP86449 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim43cP86449 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.27□□□□□ -0.45
Trim43cP86449 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.27□□□□□ -0.45
Trim43cP86449 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.27□□□□□ -0.45
Trim43cP86449 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim43cP86449 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim43cP86449 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim43cP86449 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.27□□□□□ -0.45
Trim43cP86449 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trim43cP86449 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Trim43cP86449 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim43cP86449 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.27□□□□□ -0.45
Trim43cP86449 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim43cP86449 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim43cP86449 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.26□□□□□ -0.45
Trim43cP86449 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trim43cP86449 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim43cP86449 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim43cP86449 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim43cP86449 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim43cP86449 Gm44980-201ENSMUST00000205826 314 ntBASIC12.26□□□□□ -0.45
Trim43cP86449 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.26□□□□□ -0.45
Trim43cP86449 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim43cP86449 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim43cP86449 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.26□□□□□ -0.45
Trim43cP86449 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.26□□□□□ -0.45
Trim43cP86449 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim43cP86449 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim43cP86449 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim43cP86449 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43cP86449 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim43cP86449 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.26□□□□□ -0.45
Trim43cP86449 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43cP86449 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43cP86449 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43cP86449 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43cP86449 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43cP86449 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43cP86449 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43cP86449 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43cP86449 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43cP86449 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Trim43cP86449 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43cP86449 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim43cP86449 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms