Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Hmgb1P63158 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.46□□□□□ -0.41
Hmgb1P63158 Gm8199-201ENSMUST00000121323 823 ntBASIC12.46□□□□□ -0.41
Hmgb1P63158 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Hmgb1P63158 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hmgb1P63158 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.46□□□□□ -0.41
Hmgb1P63158 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.46□□□□□ -0.41
Hmgb1P63158 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.46□□□□□ -0.41
Hmgb1P63158 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.46□□□□□ -0.41
Hmgb1P63158 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Hmgb1P63158 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgb1P63158 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Hmgb1P63158 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgb1P63158 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgb1P63158 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgb1P63158 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.46□□□□□ -0.42
Hmgb1P63158 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgb1P63158 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.46□□□□□ -0.42
Hmgb1P63158 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgb1P63158 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgb1P63158 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.45□□□□□ -0.42
Hmgb1P63158 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.45□□□□□ -0.42
Hmgb1P63158 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Gm15617-201ENSMUST00000118973 771 ntBASIC12.45□□□□□ -0.42
Hmgb1P63158 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Gm3150-201ENSMUST00000166418 204 ntBASIC12.45□□□□□ -0.42
Hmgb1P63158 Olfml3-204ENSMUST00000169286 874 ntBASIC12.45□□□□□ -0.42
Hmgb1P63158 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Gm8342-201ENSMUST00000209839 757 ntBASIC12.45□□□□□ -0.42
Hmgb1P63158 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hmgb1P63158 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Hmgb1P63158 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgb1P63158 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmgb1P63158 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Hmgb1P63158 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Mir877-201ENSMUST00000104738 85 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Gm14017-201ENSMUST00000121934 386 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.44□□□□□ -0.42
Hmgb1P63158 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgb1P63158 Gm5733-201ENSMUST00000190232 939 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 Gm45186-201ENSMUST00000206874 478 ntBASIC12.44□□□□□ -0.42
Hmgb1P63158 4930568E12Rik-202ENSMUST00000216694 781 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms