Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Lsm6P62313 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.92□□□□□ -0.82
Lsm6P62313 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Lsm6P62313 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.92□□□□□ -0.82
Lsm6P62313 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.92□□□□□ -0.82
Lsm6P62313 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Lsm6P62313 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Lsm6P62313 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Lsm6P62313 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Lsm6P62313 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Lsm6P62313 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm6P62313 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.92□□□□□ -0.82
Lsm6P62313 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Lsm6P62313 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Lsm6P62313 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.91□□□□□ -0.82
Lsm6P62313 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.91□□□□□ -0.82
Lsm6P62313 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Lsm6P62313 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Lsm6P62313 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Lsm6P62313 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Lsm6P62313 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Lsm6P62313 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.91□□□□□ -0.82
Lsm6P62313 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.91□□□□□ -0.82
Lsm6P62313 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 Gm37284-201ENSMUST00000193607 539 ntBASIC9.91□□□□□ -0.82
Lsm6P62313 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 Gm43058-201ENSMUST00000197645 625 ntBASIC9.91□□□□□ -0.82
Lsm6P62313 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.91□□□□□ -0.82
Lsm6P62313 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.91□□□□□ -0.82
Lsm6P62313 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.91□□□□□ -0.82
Lsm6P62313 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.91□□□□□ -0.82
Lsm6P62313 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.91□□□□□ -0.82
Lsm6P62313 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.91□□□□□ -0.82
Lsm6P62313 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.91□□□□□ -0.82
Lsm6P62313 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
Lsm6P62313 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm6P62313 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm6P62313 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Lsm6P62313 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm6P62313 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm6P62313 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
Lsm6P62313 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm6P62313 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Lsm6P62313 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.9□□□□□ -0.82
Lsm6P62313 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm6P62313 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Lsm6P62313 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm6P62313 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm6P62313 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm6P62313 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm6P62313 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm6P62313 Gm12165-201ENSMUST00000117047 342 ntBASIC9.9□□□□□ -0.82
Lsm6P62313 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms