Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sf3b6P59708 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.03□□□□□ -0.8
Sf3b6P59708 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.03□□□□□ -0.8
Sf3b6P59708 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.03□□□□□ -0.8
Sf3b6P59708 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.03□□□□□ -0.8
Sf3b6P59708 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.03□□□□□ -0.8
Sf3b6P59708 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.03□□□□□ -0.8
Sf3b6P59708 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Gm32111-201ENSMUST00000207689 846 ntBASIC10.03□□□□□ -0.8
Sf3b6P59708 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Gm7940-201ENSMUST00000218195 769 ntBASIC10.03□□□□□ -0.8
Sf3b6P59708 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.03□□□□□ -0.8
Sf3b6P59708 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sf3b6P59708 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.03□□□□□ -0.8
Sf3b6P59708 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.03□□□□□ -0.8
Sf3b6P59708 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sf3b6P59708 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.02□□□□□ -0.8
Sf3b6P59708 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sf3b6P59708 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.02□□□□□ -0.8
Sf3b6P59708 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Sf3b6P59708 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sf3b6P59708 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sf3b6P59708 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sf3b6P59708 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Sf3b6P59708 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Sf3b6P59708 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sf3b6P59708 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Sf3b6P59708 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.8
Sf3b6P59708 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sf3b6P59708 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.02□□□□□ -0.81
Sf3b6P59708 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm13665-201ENSMUST00000120830 528 ntBASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.02□□□□□ -0.81
Sf3b6P59708 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.02□□□□□ -0.81
Sf3b6P59708 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm4857-201ENSMUST00000192718 785 ntBASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm38317-201ENSMUST00000195564 343 ntBASIC10.02□□□□□ -0.81
Sf3b6P59708 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm9353-201ENSMUST00000200472 604 ntBASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.02□□□□□ -0.81
Sf3b6P59708 Rps4l-202ENSMUST00000204242 789 ntBASIC10.02□□□□□ -0.81
Sf3b6P59708 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms