Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Gm12247-201ENSMUST00000117585 670 ntBASIC12.7□□□□□ -0.38
Rrp1P56183 Gm12579-201ENSMUST00000118040 783 ntBASIC12.7□□□□□ -0.38
Rrp1P56183 Gm15374-201ENSMUST00000119313 844 ntBASIC12.7□□□□□ -0.38
Rrp1P56183 Gm12196-201ENSMUST00000120954 262 ntBASIC12.7□□□□□ -0.38
Rrp1P56183 Gm14277-201ENSMUST00000121195 360 ntBASIC12.7□□□□□ -0.38
Rrp1P56183 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.7□□□□□ -0.38
Rrp1P56183 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.7□□□□□ -0.38
Rrp1P56183 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.7□□□□□ -0.38
Rrp1P56183 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Gm2965-201ENSMUST00000198365 343 ntBASIC12.7□□□□□ -0.38
Rrp1P56183 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.7□□□□□ -0.38
Rrp1P56183 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.7□□□□□ -0.38
Rrp1P56183 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.7□□□□□ -0.38
Rrp1P56183 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Rrp1P56183 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rrp1P56183 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.7□□□□□ -0.38
Rrp1P56183 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rrp1P56183 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rrp1P56183 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rrp1P56183 Gm25148-201ENSMUST00000104611 123 ntBASIC12.69□□□□□ -0.38
Rrp1P56183 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.69□□□□□ -0.38
Rrp1P56183 Gm12997-201ENSMUST00000120207 640 ntBASIC12.69□□□□□ -0.38
Rrp1P56183 Gm24074-201ENSMUST00000158178 260 ntBASIC12.69□□□□□ -0.38
Rrp1P56183 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.69□□□□□ -0.38
Rrp1P56183 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.69□□□□□ -0.38
Rrp1P56183 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.69□□□□□ -0.38
Rrp1P56183 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rrp1P56183 Gm7003-201ENSMUST00000195089 312 ntBASIC12.69□□□□□ -0.38
Rrp1P56183 Gm5302-201ENSMUST00000202130 796 ntBASIC12.69□□□□□ -0.38
Rrp1P56183 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.69□□□□□ -0.38
Rrp1P56183 Gm5363-201ENSMUST00000211927 938 ntBASIC12.69□□□□□ -0.38
Rrp1P56183 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.69□□□□□ -0.38
Rrp1P56183 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Rrp1P56183 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rrp1P56183 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.69□□□□□ -0.38
Rrp1P56183 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rrp1P56183 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rrp1P56183 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rrp1P56183 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.69□□□□□ -0.38
Rrp1P56183 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.68□□□□□ -0.38
Rrp1P56183 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.68□□□□□ -0.38
Rrp1P56183 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rrp1P56183 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rrp1P56183 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 174.9 ms