Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.91□□□□□ -0.5
Shmt1P50431 Gm22846-201ENSMUST00000157706 270 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Gm5100-201ENSMUST00000195631 589 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 Gm42816-201ENSMUST00000198433 325 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 Gm42867-201ENSMUST00000202995 469 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.91□□□□□ -0.5
Shmt1P50431 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.91□□□□□ -0.5
Shmt1P50431 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Shmt1P50431 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.9□□□□□ -0.5
Shmt1P50431 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Shmt1P50431 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.9□□□□□ -0.5
Shmt1P50431 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.9□□□□□ -0.5
Shmt1P50431 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
Shmt1P50431 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.9□□□□□ -0.5
Shmt1P50431 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.9□□□□□ -0.5
Shmt1P50431 Gm13117-201ENSMUST00000120894 691 ntBASIC11.9□□□□□ -0.5
Shmt1P50431 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.9□□□□□ -0.5
Shmt1P50431 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.9□□□□□ -0.5
Shmt1P50431 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.9□□□□□ -0.5
Shmt1P50431 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Shmt1P50431 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Shmt1P50431 Gm29410-201ENSMUST00000188383 694 ntBASIC11.9□□□□□ -0.5
Shmt1P50431 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.9□□□□□ -0.5
Shmt1P50431 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.9□□□□□ -0.5
Shmt1P50431 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.9□□□□□ -0.5
Shmt1P50431 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.9□□□□□ -0.5
Shmt1P50431 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.9□□□□□ -0.5
Shmt1P50431 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.9□□□□□ -0.5
Shmt1P50431 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.9□□□□□ -0.5
Shmt1P50431 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.9□□□□□ -0.5
Shmt1P50431 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Shmt1P50431 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Shmt1P50431 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Shmt1P50431 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Shmt1P50431 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Shmt1P50431 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Shmt1P50431 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Shmt1P50431 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Shmt1P50431 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shmt1P50431 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shmt1P50431 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shmt1P50431 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shmt1P50431 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Shmt1P50431 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shmt1P50431 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shmt1P50431 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shmt1P50431 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.89□□□□□ -0.51
Shmt1P50431 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shmt1P50431 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms