Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.51□□□□□ -0.57
SftpbP50405 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SftpbP50405 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Gm10288-201ENSMUST00000084614 537 ntBASIC11.51□□□□□ -0.57
SftpbP50405 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.51□□□□□ -0.57
SftpbP50405 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SftpbP50405 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SftpbP50405 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SftpbP50405 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
SftpbP50405 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.5□□□□□ -0.57
SftpbP50405 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SftpbP50405 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
SftpbP50405 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Gm14724-201ENSMUST00000118400 537 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.5□□□□□ -0.57
SftpbP50405 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Mir1938-201ENSMUST00000158746 100 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SftpbP50405 Gm10807-201ENSMUST00000177134 795 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Gm16505-201ENSMUST00000179981 232 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Gm8100-201ENSMUST00000182906 988 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Gm2965-201ENSMUST00000198365 343 ntBASIC11.5□□□□□ -0.57
SftpbP50405 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.5□□□□□ -0.57
SftpbP50405 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
SftpbP50405 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.5□□□□□ -0.57
SftpbP50405 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.5□□□□□ -0.57
SftpbP50405 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.5□□□□□ -0.57
SftpbP50405 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.5□□□□□ -0.57
SftpbP50405 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SftpbP50405 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.49□□□□□ -0.57
SftpbP50405 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SftpbP50405 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SftpbP50405 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SftpbP50405 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.49□□□□□ -0.57
SftpbP50405 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.49□□□□□ -0.57
SftpbP50405 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SftpbP50405 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
SftpbP50405 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SftpbP50405 Gm13916-201ENSMUST00000117368 628 ntBASIC11.49□□□□□ -0.57
SftpbP50405 Gm12579-201ENSMUST00000118040 783 ntBASIC11.49□□□□□ -0.57
SftpbP50405 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.49□□□□□ -0.57
SftpbP50405 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms