Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.85□□□□□ -0.51
SftpdP50404 Gm19246-201ENSMUST00000173599 255 ntBASIC11.85□□□□□ -0.51
SftpdP50404 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.85□□□□□ -0.51
SftpdP50404 Gm17826-201ENSMUST00000189720 798 ntBASIC11.85□□□□□ -0.51
SftpdP50404 Gm45118-201ENSMUST00000208928 825 ntBASIC11.85□□□□□ -0.51
SftpdP50404 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.85□□□□□ -0.51
SftpdP50404 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.85□□□□□ -0.51
SftpdP50404 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SftpdP50404 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
SftpdP50404 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SftpdP50404 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
SftpdP50404 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.85□□□□□ -0.51
SftpdP50404 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
SftpdP50404 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SftpdP50404 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SftpdP50404 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.84□□□□□ -0.51
SftpdP50404 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SftpdP50404 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
SftpdP50404 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Gm13422-201ENSMUST00000118834 504 ntBASIC11.84□□□□□ -0.51
SftpdP50404 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.84□□□□□ -0.51
SftpdP50404 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.84□□□□□ -0.51
SftpdP50404 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SftpdP50404 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Gm37299-201ENSMUST00000193951 826 ntBASIC11.84□□□□□ -0.51
SftpdP50404 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.84□□□□□ -0.51
SftpdP50404 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.84□□□□□ -0.51
SftpdP50404 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.84□□□□□ -0.51
SftpdP50404 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SftpdP50404 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.84□□□□□ -0.51
SftpdP50404 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SftpdP50404 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.84□□□□□ -0.51
SftpdP50404 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.84□□□□□ -0.51
SftpdP50404 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.84□□□□□ -0.51
SftpdP50404 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.84□□□□□ -0.51
SftpdP50404 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SftpdP50404 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.84□□□□□ -0.51
SftpdP50404 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SftpdP50404 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
SftpdP50404 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SftpdP50404 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SftpdP50404 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
SftpdP50404 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
SftpdP50404 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.83□□□□□ -0.52
SftpdP50404 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SftpdP50404 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.83□□□□□ -0.52
SftpdP50404 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.83□□□□□ -0.52
SftpdP50404 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.83□□□□□ -0.52
SftpdP50404 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SftpdP50404 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SftpdP50404 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms