Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 Gm25318-201ENSMUST00000122554 314 ntBASIC9.96□□□□□ -0.82
GdnfP48540 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.96□□□□□ -0.82
GdnfP48540 Gm5970-201ENSMUST00000131638 1216 ntBASIC9.96□□□□□ -0.82
GdnfP48540 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Gm26361-201ENSMUST00000158868 186 ntBASIC9.96□□□□□ -0.82
GdnfP48540 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
GdnfP48540 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
GdnfP48540 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
GdnfP48540 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC9.96□□□□□ -0.82
GdnfP48540 Gm38217-201ENSMUST00000194358 910 ntBASIC9.96□□□□□ -0.82
GdnfP48540 Gm18893-201ENSMUST00000198416 943 ntBASIC9.96□□□□□ -0.82
GdnfP48540 Gm43066-201ENSMUST00000199589 1260 ntBASIC9.96□□□□□ -0.82
GdnfP48540 Gm4607-201ENSMUST00000206649 577 ntBASIC9.96□□□□□ -0.82
GdnfP48540 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC9.96□□□□□ -0.82
GdnfP48540 Gm8913-201ENSMUST00000209491 641 ntBASIC9.96□□□□□ -0.82
GdnfP48540 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.96□□□□□ -0.82
GdnfP48540 AC159205.5-202ENSMUST00000224849 386 ntBASIC9.96□□□□□ -0.82
GdnfP48540 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Gm8872-201ENSMUST00000197475 1341 ntBASIC9.96□□□□□ -0.82
GdnfP48540 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
GdnfP48540 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
GdnfP48540 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
GdnfP48540 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
GdnfP48540 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.95□□□□□ -0.82
GdnfP48540 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Gm14659-201ENSMUST00000117667 843 ntBASIC9.95□□□□□ -0.82
GdnfP48540 Gm15171-201ENSMUST00000122191 334 ntBASIC9.95□□□□□ -0.82
GdnfP48540 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 Gm6114-201ENSMUST00000182472 968 ntBASIC9.95□□□□□ -0.82
GdnfP48540 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.95□□□□□ -0.82
GdnfP48540 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
GdnfP48540 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.95□□□□□ -0.82
GdnfP48540 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
GdnfP48540 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
GdnfP48540 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms