Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vps4bP46467 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Vps4bP46467 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.46□□□□□ -0.58
Vps4bP46467 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.45□□□□□ -0.58
Vps4bP46467 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Vps4bP46467 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Vps4bP46467 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Vps4bP46467 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.45□□□□□ -0.58
Vps4bP46467 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Vps4bP46467 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Vps4bP46467 Gm12247-201ENSMUST00000117585 670 ntBASIC11.45□□□□□ -0.58
Vps4bP46467 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.45□□□□□ -0.58
Vps4bP46467 Gm12266-201ENSMUST00000120311 962 ntBASIC11.45□□□□□ -0.58
Vps4bP46467 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.45□□□□□ -0.58
Vps4bP46467 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Vps4bP46467 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.45□□□□□ -0.58
Vps4bP46467 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.45□□□□□ -0.58
Vps4bP46467 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Vps4bP46467 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Vps4bP46467 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.45□□□□□ -0.58
Vps4bP46467 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Vps4bP46467 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Vps4bP46467 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.45□□□□□ -0.58
Vps4bP46467 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vps4bP46467 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vps4bP46467 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vps4bP46467 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vps4bP46467 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Vps4bP46467 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.44□□□□□ -0.58
Vps4bP46467 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Vps4bP46467 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Gm23200-201ENSMUST00000104379 132 ntBASIC11.44□□□□□ -0.58
Vps4bP46467 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vps4bP46467 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Vps4bP46467 Gm15617-201ENSMUST00000118973 771 ntBASIC11.44□□□□□ -0.58
Vps4bP46467 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.44□□□□□ -0.58
Vps4bP46467 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.44□□□□□ -0.58
Vps4bP46467 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Vps4bP46467 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vps4bP46467 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.44□□□□□ -0.58
Vps4bP46467 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.44□□□□□ -0.58
Vps4bP46467 Gm9211-201ENSMUST00000182882 975 ntBASIC11.44□□□□□ -0.58
Vps4bP46467 Gm27530-201ENSMUST00000184096 98 ntBASIC11.44□□□□□ -0.58
Vps4bP46467 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Vps4bP46467 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.44□□□□□ -0.58
Vps4bP46467 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.44□□□□□ -0.58
Vps4bP46467 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.44□□□□□ -0.58
Vps4bP46467 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.44□□□□□ -0.58
Vps4bP46467 Gm8342-201ENSMUST00000209839 757 ntBASIC11.44□□□□□ -0.58
Vps4bP46467 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.44□□□□□ -0.58
Vps4bP46467 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Vps4bP46467 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.44□□□□□ -0.58
Vps4bP46467 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Vps4bP46467 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Vps4bP46467 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Vps4bP46467 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vps4bP46467 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms