Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
HttP42859 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
HttP42859 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC11.58□□□□□ -0.56
HttP42859 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Trav9n-1-201ENSMUST00000185224 339 ntBASIC11.58□□□□□ -0.56
HttP42859 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC11.58□□□□□ -0.56
HttP42859 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.58□□□□□ -0.56
HttP42859 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
HttP42859 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC11.58□□□□□ -0.56
HttP42859 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HttP42859 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
HttP42859 CT025538.1-201ENSMUST00000223638 369 ntBASIC11.58□□□□□ -0.56
HttP42859 AC140426.1-201ENSMUST00000227933 459 ntBASIC11.58□□□□□ -0.56
HttP42859 AC164883.7-201ENSMUST00000228534 851 ntBASIC11.58□□□□□ -0.56
HttP42859 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
HttP42859 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.57□□□□□ -0.56
HttP42859 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
HttP42859 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.57□□□□□ -0.56
HttP42859 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Gng12-207ENSMUST00000114228 748 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC11.57□□□□□ -0.56
HttP42859 Gm29157-201ENSMUST00000188753 612 ntBASIC11.57□□□□□ -0.56
HttP42859 BC002189-201ENSMUST00000195674 598 ntBASIC11.57□□□□□ -0.56
HttP42859 Gm18857-201ENSMUST00000210421 901 ntBASIC11.57□□□□□ -0.56
HttP42859 Gnpnat1-202ENSMUST00000226276 710 ntBASIC11.57□□□□□ -0.56
HttP42859 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
HttP42859 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
HttP42859 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.57□□□□□ -0.56
HttP42859 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.57□□□□□ -0.56
HttP42859 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 AC170810.2-201ENSMUST00000228384 1232 ntBASIC11.57□□□□□ -0.56
HttP42859 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.57□□□□□ -0.56
HttP42859 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
HttP42859 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC11.57□□□□□ -0.56
HttP42859 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
HttP42859 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.56□□□□□ -0.56
HttP42859 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
HttP42859 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
HttP42859 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
HttP42859 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC11.56□□□□□ -0.56
HttP42859 Gm44124-201ENSMUST00000204159 472 ntBASIC11.56□□□□□ -0.56
HttP42859 AC140393.4-201ENSMUST00000226994 765 ntBASIC11.56□□□□□ -0.56
HttP42859 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
HttP42859 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
HttP42859 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
HttP42859 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
HttP42859 Gm11800-201ENSMUST00000120050 579 ntBASIC11.56□□□□□ -0.56
HttP42859 Gm16365-201ENSMUST00000122987 629 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HttP42859 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.56□□□□□ -0.56
HttP42859 Atf7-201ENSMUST00000096143 390 ntBASIC11.56□□□□□ -0.56
HttP42859 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms