Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
VhlP40338 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.26□□□□□ -0.93
VhlP40338 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
VhlP40338 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.26□□□□□ -0.93
VhlP40338 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
VhlP40338 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
VhlP40338 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.26□□□□□ -0.93
VhlP40338 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.26□□□□□ -0.93
VhlP40338 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.26□□□□□ -0.93
VhlP40338 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
VhlP40338 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
VhlP40338 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
VhlP40338 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
VhlP40338 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
VhlP40338 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
VhlP40338 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.26□□□□□ -0.93
VhlP40338 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
VhlP40338 Gm10807-201ENSMUST00000177134 795 ntBASIC9.26□□□□□ -0.93
VhlP40338 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.26□□□□□ -0.93
VhlP40338 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC9.26□□□□□ -0.93
VhlP40338 Gm37301-201ENSMUST00000195412 568 ntBASIC9.26□□□□□ -0.93
VhlP40338 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Gm9353-201ENSMUST00000200472 604 ntBASIC9.26□□□□□ -0.93
VhlP40338 Gm44651-201ENSMUST00000207343 372 ntBASIC9.26□□□□□ -0.93
VhlP40338 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.26□□□□□ -0.93
VhlP40338 Gm17827-201ENSMUST00000211825 742 ntBASIC9.26□□□□□ -0.93
VhlP40338 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.26□□□□□ -0.93
VhlP40338 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.26□□□□□ -0.93
VhlP40338 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
VhlP40338 Olfr582-201ENSMUST00000098212 960 ntBASIC9.26□□□□□ -0.93
VhlP40338 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
VhlP40338 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
VhlP40338 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.26□□□□□ -0.93
VhlP40338 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
VhlP40338 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
VhlP40338 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
VhlP40338 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Gm2991-201ENSMUST00000173338 480 ntBASIC9.25□□□□□ -0.93
VhlP40338 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.25□□□□□ -0.93
VhlP40338 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.25□□□□□ -0.93
VhlP40338 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Gm6334-201ENSMUST00000207083 228 ntBASIC9.25□□□□□ -0.93
VhlP40338 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
VhlP40338 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
VhlP40338 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.25□□□□□ -0.93
VhlP40338 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
VhlP40338 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms