Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 AC154186.1-201ENSMUST00000227711 1597 ntBASIC14.57□□□□□ -0.08
Col18a1P39061 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 Gm8806-201ENSMUST00000120076 1407 ntBASIC14.57□□□□□ -0.08
Col18a1P39061 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC14.57□□□□□ -0.08
Col18a1P39061 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 Gm12362-201ENSMUST00000121986 342 ntBASIC14.57□□□□□ -0.08
Col18a1P39061 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Col18a1P39061 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC14.57□□□□□ -0.08
Col18a1P39061 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC14.57□□□□□ -0.08
Col18a1P39061 AC161581.1-201ENSMUST00000228696 318 ntBASIC14.57□□□□□ -0.08
Col18a1P39061 Elobl-202ENSMUST00000082339 300 ntBASIC14.57□□□□□ -0.08
Col18a1P39061 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.57□□□□□ -0.08
Col18a1P39061 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Col18a1P39061 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col18a1P39061 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC14.57□□□□□ -0.08
Col18a1P39061 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.56□□□□□ -0.08
Col18a1P39061 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC14.56□□□□□ -0.08
Col18a1P39061 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Col18a1P39061 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC14.56□□□□□ -0.08
Col18a1P39061 Gm2492-201ENSMUST00000221355 1394 ntBASIC14.56□□□□□ -0.08
Col18a1P39061 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC14.56□□□□□ -0.08
Col18a1P39061 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Col18a1P39061 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Gm45363-201ENSMUST00000210196 1294 ntBASIC14.56□□□□□ -0.08
Col18a1P39061 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC14.56□□□□□ -0.08
Col18a1P39061 Gm18783-201ENSMUST00000220465 1151 ntBASIC14.56□□□□□ -0.08
Col18a1P39061 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Gm26205-201ENSMUST00000082907 134 ntBASIC14.56□□□□□ -0.08
Col18a1P39061 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.56□□□□□ -0.08
Col18a1P39061 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col18a1P39061 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col18a1P39061 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col18a1P39061 Gm12011-201ENSMUST00000119734 618 ntBASIC14.55□□□□□ -0.08
Col18a1P39061 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Col18a1P39061 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC14.55□□□□□ -0.08
Col18a1P39061 Zkscan7-205ENSMUST00000216462 990 ntBASIC14.55□□□□□ -0.08
Col18a1P39061 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col18a1P39061 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col18a1P39061 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col18a1P39061 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Col18a1P39061 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.55□□□□□ -0.08
Col18a1P39061 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Gm38220-201ENSMUST00000195774 1447 ntBASIC14.55□□□□□ -0.08
Col18a1P39061 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col18a1P39061 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.55□□□□□ -0.08
Col18a1P39061 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC14.55□□□□□ -0.08
Col18a1P39061 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC14.55□□□□□ -0.08
Col18a1P39061 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col18a1P39061 Gm9578-201ENSMUST00000182354 753 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms