Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC8.9□□□□□ -0.99
Rom1P32958 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rom1P32958 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rom1P32958 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Rom1P32958 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rom1P32958 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rom1P32958 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Rom1P32958 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rom1P32958 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rom1P32958 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Rom1P32958 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Gm3372-201ENSMUST00000198806 1792 ntBASIC8.89□□□□□ -0.99
Rom1P32958 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC8.89□□□□□ -0.99
Rom1P32958 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC8.89□□□□□ -0.99
Rom1P32958 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Rom1P32958 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC8.89□□□□□ -0.99
Rom1P32958 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC8.89□□□□□ -0.99
Rom1P32958 H2-Q3-201ENSMUST00000172583 608 ntBASIC8.89□□□□□ -0.99
Rom1P32958 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC8.89□□□□□ -0.99
Rom1P32958 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Gm38321-201ENSMUST00000195053 235 ntBASIC8.89□□□□□ -0.99
Rom1P32958 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC8.89□□□□□ -0.99
Rom1P32958 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC8.89□□□□□ -0.99
Rom1P32958 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC8.89□□□□□ -0.99
Rom1P32958 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC8.89□□□□□ -0.99
Rom1P32958 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Rom1P32958 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC8.89□□□□□ -0.99
Rom1P32958 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Rom1P32958 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Gm7742-201ENSMUST00000167648 1527 ntBASIC8.89□□□□□ -0.99
Rom1P32958 Gm7732-201ENSMUST00000170486 1527 ntBASIC8.89□□□□□ -0.99
Rom1P32958 Gm7740-201ENSMUST00000186171 1527 ntBASIC8.89□□□□□ -0.99
Rom1P32958 Gm7736-201ENSMUST00000096981 1527 ntBASIC8.89□□□□□ -0.99
Rom1P32958 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Rom1P32958 Gm44062-201ENSMUST00000203312 4857 ntBASIC8.89□□□□□ -0.99
Rom1P32958 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Rom1P32958 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Rom1P32958 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rom1P32958 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Rom1P32958 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Rom1P32958 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Rom1P32958 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Rom1P32958 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC8.88□□□□□ -0.99
Rom1P32958 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 AC129336.1-201ENSMUST00000220224 2277 ntBASIC8.88□□□□□ -0.99
Rom1P32958 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Rom1P32958 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rom1P32958 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rom1P32958 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rom1P32958 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rom1P32958 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rom1P32958 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rom1P32958 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rom1P32958 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC8.88□□□□□ -0.99
Rom1P32958 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC8.88□□□□□ -0.99
Rom1P32958 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Rom1P32958 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC8.88□□□□□ -0.99
Rom1P32958 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Gm11478-201ENSMUST00000117851 599 ntBASIC8.88□□□□□ -0.99
Rom1P32958 Gm15547-201ENSMUST00000122152 333 ntBASIC8.88□□□□□ -0.99
Rom1P32958 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rom1P32958 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC8.88□□□□□ -0.99
Rom1P32958 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms