Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
BgnP28653 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
BgnP28653 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
BgnP28653 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
BgnP28653 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.39□□□□□ -0.75
BgnP28653 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
BgnP28653 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
BgnP28653 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
BgnP28653 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
BgnP28653 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
BgnP28653 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
BgnP28653 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
BgnP28653 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
BgnP28653 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
BgnP28653 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
BgnP28653 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
BgnP28653 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.38□□□□□ -0.75
BgnP28653 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
BgnP28653 Gm22018-201ENSMUST00000104357 131 ntBASIC10.38□□□□□ -0.75
BgnP28653 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.38□□□□□ -0.75
BgnP28653 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
BgnP28653 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
BgnP28653 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.38□□□□□ -0.75
BgnP28653 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
BgnP28653 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
BgnP28653 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
BgnP28653 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
BgnP28653 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
BgnP28653 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.37□□□□□ -0.75
BgnP28653 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
BgnP28653 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
BgnP28653 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.37□□□□□ -0.75
BgnP28653 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
BgnP28653 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 Gm12015-201ENSMUST00000117065 843 ntBASIC10.37□□□□□ -0.75
BgnP28653 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.37□□□□□ -0.75
BgnP28653 Mir1896-201ENSMUST00000122641 81 ntBASIC10.37□□□□□ -0.75
BgnP28653 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
BgnP28653 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.37□□□□□ -0.75
BgnP28653 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.37□□□□□ -0.75
BgnP28653 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
BgnP28653 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.37□□□□□ -0.75
BgnP28653 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.37□□□□□ -0.75
BgnP28653 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.37□□□□□ -0.75
BgnP28653 Gm37597-201ENSMUST00000191853 382 ntBASIC10.37□□□□□ -0.75
BgnP28653 Gm38117-201ENSMUST00000194653 939 ntBASIC10.37□□□□□ -0.75
BgnP28653 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.37□□□□□ -0.75
BgnP28653 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.37□□□□□ -0.75
BgnP28653 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
BgnP28653 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.37□□□□□ -0.75
BgnP28653 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms