Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm18968-201ENSMUST00000221319 862 ntBASIC9.4□□□□□ -0.9
Col8a2P25318 CT030653.1-201ENSMUST00000224382 1279 ntBASIC9.4□□□□□ -0.9
Col8a2P25318 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Col8a2P25318 Gm23680-201ENSMUST00000083162 164 ntBASIC9.4□□□□□ -0.9
Col8a2P25318 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.4□□□□□ -0.9
Col8a2P25318 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Col8a2P25318 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col8a2P25318 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.4□□□□□ -0.9
Col8a2P25318 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col8a2P25318 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col8a2P25318 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col8a2P25318 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.4□□□□□ -0.91
Col8a2P25318 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Col8a2P25318 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col8a2P25318 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Col8a2P25318 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.4□□□□□ -0.91
Col8a2P25318 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.4□□□□□ -0.91
Col8a2P25318 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col8a2P25318 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col8a2P25318 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Col8a2P25318 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Col8a2P25318 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
Col8a2P25318 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Col8a2P25318 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.39□□□□□ -0.91
Col8a2P25318 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Col8a2P25318 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Col8a2P25318 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC9.39□□□□□ -0.91
Col8a2P25318 Gm15197-201ENSMUST00000120526 478 ntBASIC9.39□□□□□ -0.91
Col8a2P25318 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.39□□□□□ -0.91
Col8a2P25318 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC9.39□□□□□ -0.91
Col8a2P25318 Gm9358-201ENSMUST00000183067 927 ntBASIC9.39□□□□□ -0.91
Col8a2P25318 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.39□□□□□ -0.91
Col8a2P25318 Gm45219-201ENSMUST00000205602 465 ntBASIC9.39□□□□□ -0.91
Col8a2P25318 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC9.39□□□□□ -0.91
Col8a2P25318 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Col8a2P25318 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Col8a2P25318 Gm25580-201ENSMUST00000083409 327 ntBASIC9.39□□□□□ -0.91
Col8a2P25318 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Col8a2P25318 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Col8a2P25318 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Col8a2P25318 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col8a2P25318 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.38□□□□□ -0.91
Col8a2P25318 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Col8a2P25318 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.38□□□□□ -0.91
Col8a2P25318 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
Col8a2P25318 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Gm16397-201ENSMUST00000122201 494 ntBASIC9.38□□□□□ -0.91
Col8a2P25318 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.38□□□□□ -0.91
Col8a2P25318 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.38□□□□□ -0.91
Col8a2P25318 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.38□□□□□ -0.91
Col8a2P25318 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC9.38□□□□□ -0.91
Col8a2P25318 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col8a2P25318 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms