Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm15374-201ENSMUST00000119313 844 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm25492-201ENSMUST00000157383 129 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm22923-201ENSMUST00000174952 110 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Mir7051-201ENSMUST00000184167 73 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm37905-201ENSMUST00000195310 341 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm37826-201ENSMUST00000195329 322 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm44126-201ENSMUST00000204831 514 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm9463-201ENSMUST00000206707 601 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 CT010431.1-201ENSMUST00000221249 1080 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Tnfrsf1bP25119 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm13333-201ENSMUST00000119424 781 ntBASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm14942-201ENSMUST00000119642 336 ntBASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm16219-201ENSMUST00000120096 274 ntBASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm22846-201ENSMUST00000157706 270 ntBASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm3508-201ENSMUST00000186012 792 ntBASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm37458-201ENSMUST00000194055 410 ntBASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1bP25119 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms