Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.87□□□□□ -0.67
BdnfP21237 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.87□□□□□ -0.67
BdnfP21237 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.87□□□□□ -0.67
BdnfP21237 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Tomt-201ENSMUST00000106969 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.87□□□□□ -0.67
BdnfP21237 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
BdnfP21237 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
BdnfP21237 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
BdnfP21237 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
BdnfP21237 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
BdnfP21237 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.86□□□□□ -0.67
BdnfP21237 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
BdnfP21237 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
BdnfP21237 Gm12463-201ENSMUST00000118271 849 ntBASIC10.86□□□□□ -0.67
BdnfP21237 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Gm24749-201ENSMUST00000157838 343 ntBASIC10.86□□□□□ -0.67
BdnfP21237 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Gm8343-201ENSMUST00000182705 994 ntBASIC10.86□□□□□ -0.67
BdnfP21237 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.86□□□□□ -0.67
BdnfP21237 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.86□□□□□ -0.67
BdnfP21237 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.86□□□□□ -0.67
BdnfP21237 Gm37666-201ENSMUST00000194110 866 ntBASIC10.86□□□□□ -0.67
BdnfP21237 Gm7003-201ENSMUST00000195089 312 ntBASIC10.86□□□□□ -0.67
BdnfP21237 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.86□□□□□ -0.67
BdnfP21237 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.86□□□□□ -0.67
BdnfP21237 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
BdnfP21237 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
BdnfP21237 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.86□□□□□ -0.67
BdnfP21237 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
BdnfP21237 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.86□□□□□ -0.67
BdnfP21237 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
BdnfP21237 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
BdnfP21237 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
BdnfP21237 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
BdnfP21237 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.85□□□□□ -0.67
BdnfP21237 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.85□□□□□ -0.67
BdnfP21237 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.85□□□□□ -0.67
BdnfP21237 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.85□□□□□ -0.67
BdnfP21237 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Exosc10-201ENSMUST00000017408 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
BdnfP21237 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
BdnfP21237 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
BdnfP21237 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
BdnfP21237 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.85□□□□□ -0.67
BdnfP21237 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.85□□□□□ -0.67
BdnfP21237 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.85□□□□□ -0.67
BdnfP21237 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms