Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm29787-201ENSMUST00000222129 849 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hoxa4P06798 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.11□□□□□ -0.63
Hoxa4P06798 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm8531-201ENSMUST00000188319 893 ntBASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm39288-201ENSMUST00000210554 446 ntBASIC11.11□□□□□ -0.63
Hoxa4P06798 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm9111-201ENSMUST00000219394 709 ntBASIC11.11□□□□□ -0.63
Hoxa4P06798 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.11□□□□□ -0.63
Hoxa4P06798 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.11□□□□□ -0.63
Hoxa4P06798 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hoxa4P06798 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxa4P06798 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxa4P06798 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.1□□□□□ -0.63
Hoxa4P06798 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxa4P06798 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hoxa4P06798 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxa4P06798 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms