Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.89□□□□□ -0.83
P04224 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.89□□□□□ -0.83
P04224 Gm22018-201ENSMUST00000104357 131 ntBASIC9.89□□□□□ -0.83
P04224 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Gm5419-201ENSMUST00000119301 527 ntBASIC9.89□□□□□ -0.83
P04224 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
P04224 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.89□□□□□ -0.83
P04224 Gm6114-201ENSMUST00000182472 968 ntBASIC9.89□□□□□ -0.83
P04224 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.89□□□□□ -0.83
P04224 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
P04224 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.89□□□□□ -0.83
P04224 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.89□□□□□ -0.83
P04224 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.89□□□□□ -0.83
P04224 Gm42627-201ENSMUST00000197347 224 ntBASIC9.89□□□□□ -0.83
P04224 Gm43133-201ENSMUST00000197472 463 ntBASIC9.89□□□□□ -0.83
P04224 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
P04224 AC140375.2-201ENSMUST00000225283 584 ntBASIC9.89□□□□□ -0.83
P04224 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.89□□□□□ -0.83
P04224 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
P04224 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
P04224 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
P04224 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
P04224 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC9.89□□□□□ -0.83
P04224 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.89□□□□□ -0.83
P04224 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC9.89□□□□□ -0.83
P04224 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.89□□□□□ -0.83
P04224 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.88□□□□□ -0.83
P04224 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
P04224 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
P04224 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.88□□□□□ -0.83
P04224 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.88□□□□□ -0.83
P04224 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
P04224 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.88□□□□□ -0.83
P04224 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.88□□□□□ -0.83
P04224 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
P04224 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.88□□□□□ -0.83
P04224 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.88□□□□□ -0.83
P04224 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.88□□□□□ -0.83
P04224 Gm27514-201ENSMUST00000183692 110 ntBASIC9.88□□□□□ -0.83
P04224 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.88□□□□□ -0.83
P04224 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.88□□□□□ -0.83
P04224 Gm5950-201ENSMUST00000213337 772 ntBASIC9.88□□□□□ -0.83
P04224 Gm19994-201ENSMUST00000217086 586 ntBASIC9.88□□□□□ -0.83
P04224 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.88□□□□□ -0.83
P04224 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.88□□□□□ -0.83
P04224 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.88□□□□□ -0.83
P04224 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.88□□□□□ -0.83
P04224 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.88□□□□□ -0.83
P04224 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
P04224 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
P04224 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
P04224 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms