Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubr1O70481 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubr1O70481 Gm14148-201ENSMUST00000122433 1008 ntBASIC14.37□□□□□ -0.11
Ubr1O70481 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC14.37□□□□□ -0.11
Ubr1O70481 Mir6953-201ENSMUST00000184745 68 ntBASIC14.37□□□□□ -0.11
Ubr1O70481 Gm8525-201ENSMUST00000189674 861 ntBASIC14.37□□□□□ -0.11
Ubr1O70481 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC14.37□□□□□ -0.11
Ubr1O70481 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC14.37□□□□□ -0.11
Ubr1O70481 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubr1O70481 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC14.37□□□□□ -0.11
Ubr1O70481 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ubr1O70481 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.36□□□□□ -0.11
Ubr1O70481 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ubr1O70481 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ubr1O70481 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Gm6425-201ENSMUST00000136332 790 ntBASIC14.36□□□□□ -0.11
Ubr1O70481 Gm13857-201ENSMUST00000139645 173 ntBASIC14.36□□□□□ -0.11
Ubr1O70481 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC14.36□□□□□ -0.11
Ubr1O70481 Gm3791-201ENSMUST00000220790 768 ntBASIC14.36□□□□□ -0.11
Ubr1O70481 AC161172.1-201ENSMUST00000227801 486 ntBASIC14.36□□□□□ -0.11
Ubr1O70481 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ubr1O70481 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubr1O70481 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ubr1O70481 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ubr1O70481 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ubr1O70481 Mir181d-201ENSMUST00000102383 72 ntBASIC14.35□□□□□ -0.11
Ubr1O70481 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC14.35□□□□□ -0.11
Ubr1O70481 Gm6686-201ENSMUST00000178455 258 ntBASIC14.35□□□□□ -0.11
Ubr1O70481 Gm5801-201ENSMUST00000182247 780 ntBASIC14.35□□□□□ -0.11
Ubr1O70481 Gm17796-201ENSMUST00000189015 1213 ntBASIC14.35□□□□□ -0.11
Ubr1O70481 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Gm9515-201ENSMUST00000200276 647 ntBASIC14.35□□□□□ -0.11
Ubr1O70481 Gm42588-201ENSMUST00000200538 1297 ntBASIC14.35□□□□□ -0.11
Ubr1O70481 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 AC133517.1-201ENSMUST00000225825 594 ntBASIC14.35□□□□□ -0.11
Ubr1O70481 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ubr1O70481 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.35□□□□□ -0.11
Ubr1O70481 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC14.35□□□□□ -0.11
Ubr1O70481 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubr1O70481 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Gm5395-201ENSMUST00000121650 915 ntBASIC14.34□□□□□ -0.11
Ubr1O70481 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC14.34□□□□□ -0.11
Ubr1O70481 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ubr1O70481 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC14.34□□□□□ -0.11
Ubr1O70481 AC164883.7-201ENSMUST00000228534 851 ntBASIC14.34□□□□□ -0.11
Ubr1O70481 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC14.34□□□□□ -0.11
Ubr1O70481 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubr1O70481 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms