Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm29001-201ENSMUST00000186177 697 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Gm28292-201ENSMUST00000186593 697 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Gm28686-201ENSMUST00000187404 609 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Gm28101-201ENSMUST00000187608 697 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Gm29076-201ENSMUST00000187689 697 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Gm28302-201ENSMUST00000187931 697 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.21□□□□□ -0.77
Rnf13O54965 Gm28646-201ENSMUST00000188220 697 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Gm28205-201ENSMUST00000189177 697 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Gm29032-201ENSMUST00000189797 697 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Gm28695-201ENSMUST00000190300 697 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Gm37448-201ENSMUST00000192795 697 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Gm38341-201ENSMUST00000195357 515 ntBASIC10.21□□□□□ -0.77
Rnf13O54965 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.21□□□□□ -0.77
Rnf13O54965 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.21□□□□□ -0.77
Rnf13O54965 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.21□□□□□ -0.77
Rnf13O54965 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.21□□□□□ -0.77
Rnf13O54965 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rnf13O54965 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rnf13O54965 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Rnf13O54965 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.21□□□□□ -0.78
Rnf13O54965 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.21□□□□□ -0.78
Rnf13O54965 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.21□□□□□ -0.78
Rnf13O54965 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Rnf13O54965 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Rnf13O54965 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Rnf13O54965 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Rnf13O54965 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Rnf13O54965 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf13O54965 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.2□□□□□ -0.78
Rnf13O54965 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.2□□□□□ -0.78
Rnf13O54965 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Gm13665-201ENSMUST00000120830 528 ntBASIC10.2□□□□□ -0.78
Rnf13O54965 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.2□□□□□ -0.78
Rnf13O54965 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.2□□□□□ -0.78
Rnf13O54965 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Rnf13O54965 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Gm38317-201ENSMUST00000195564 343 ntBASIC10.2□□□□□ -0.78
Rnf13O54965 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.2□□□□□ -0.78
Rnf13O54965 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.2□□□□□ -0.78
Rnf13O54965 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Rnf13O54965 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf13O54965 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms