Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Itgb3O54890 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Itgb3O54890 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Itgb3O54890 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Itgb3O54890 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Itgb3O54890 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Itgb3O54890 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Itgb3O54890 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Itgb3O54890 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Itgb3O54890 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Itgb3O54890 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.95□□□□□ -0.5
Itgb3O54890 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Gm25063-201ENSMUST00000104666 94 ntBASIC11.95□□□□□ -0.5
Itgb3O54890 Gm10169-201ENSMUST00000121822 348 ntBASIC11.95□□□□□ -0.5
Itgb3O54890 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.95□□□□□ -0.5
Itgb3O54890 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.95□□□□□ -0.5
Itgb3O54890 Gm25554-201ENSMUST00000158075 113 ntBASIC11.95□□□□□ -0.5
Itgb3O54890 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.95□□□□□ -0.5
Itgb3O54890 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Itgb3O54890 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.95□□□□□ -0.5
Itgb3O54890 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.95□□□□□ -0.5
Itgb3O54890 Gm28324-201ENSMUST00000187913 264 ntBASIC11.95□□□□□ -0.5
Itgb3O54890 Gm29410-201ENSMUST00000188383 694 ntBASIC11.95□□□□□ -0.5
Itgb3O54890 Gm38210-201ENSMUST00000191944 809 ntBASIC11.95□□□□□ -0.5
Itgb3O54890 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.95□□□□□ -0.5
Itgb3O54890 Gm39288-201ENSMUST00000210554 446 ntBASIC11.95□□□□□ -0.5
Itgb3O54890 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.95□□□□□ -0.5
Itgb3O54890 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Itgb3O54890 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Itgb3O54890 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Itgb3O54890 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Itgb3O54890 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Itgb3O54890 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.95□□□□□ -0.5
Itgb3O54890 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Itgb3O54890 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Itgb3O54890 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.94□□□□□ -0.5
Itgb3O54890 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.94□□□□□ -0.5
Itgb3O54890 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Itgb3O54890 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Gm12274-201ENSMUST00000120062 385 ntBASIC11.94□□□□□ -0.5
Itgb3O54890 Gm12030-201ENSMUST00000121917 223 ntBASIC11.94□□□□□ -0.5
Itgb3O54890 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Itgb3O54890 Gm8492-201ENSMUST00000182375 987 ntBASIC11.94□□□□□ -0.5
Itgb3O54890 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.94□□□□□ -0.5
Itgb3O54890 Gm37028-201ENSMUST00000194276 107 ntBASIC11.94□□□□□ -0.5
Itgb3O54890 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Itgb3O54890 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Itgb3O54890 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Itgb3O54890 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Itgb3O54890 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.94□□□□□ -0.5
Itgb3O54890 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Itgb3O54890 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Itgb3O54890 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms