Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Gm7928-201ENSMUST00000181249 701 ntBASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Gm8756-201ENSMUST00000183250 929 ntBASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 AC154354.1-203ENSMUST00000225565 1364 ntBASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gm42971-201ENSMUST00000199228 2079 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Mir181d-201ENSMUST00000102383 72 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Mir1941-201ENSMUST00000157834 83 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 n-R5s130-201ENSMUST00000178128 119 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gm24312-201ENSMUST00000178677 119 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 n-R5s106-201ENSMUST00000179060 119 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 n-R5s118-201ENSMUST00000179887 119 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Mir6359-201ENSMUST00000183668 81 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gm43547-201ENSMUST00000197729 328 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gm29100-201ENSMUST00000187564 4410 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gm22495-201ENSMUST00000104492 126 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gm5909-201ENSMUST00000119768 1281 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gm3926-201ENSMUST00000223378 1123 ntBASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc180J3QNE4 Gm43931-201ENSMUST00000204817 2870 ntBASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Gm8659-201ENSMUST00000120024 1084 ntBASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Gm7572-201ENSMUST00000182616 766 ntBASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Mir6387-201ENSMUST00000184042 108 ntBASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc180J3QNE4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Gm8684-201ENSMUST00000195078 1564 ntBASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Gm26313-201ENSMUST00000157770 308 ntBASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Gm2345-201ENSMUST00000193451 589 ntBASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 CT030195.2-201ENSMUST00000226074 1286 ntBASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc180J3QNE4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms